Index

_

__init__() (Protein method)

A

amino_acid_fractions (Protein property)

C

calculate_average_bivariate_inverse_distance_charge (in module sparrow.patterning.iwd) calculate_average_inverse_distance_charge (in module sparrow.patterning.iwd) calculate_average_inverse_distance_from_sequence (in module sparrow.patterning.iwd) calculate_delta (in module sparrow.patterning.kappa) calculate_sigma (in module sparrow.patterning.kappa) complexity (Protein property) compute_bivariate_iwd_charged_weighted() (Protein method)

compute_iwd() (Protein method) compute_iwd_charged_weighted() (Protein method) compute_kappa_x() (Protein method) compute_patch_fraction() (Protein method) compute_residue_fractions() (Protein method) compute_rg_patch_fraction() (Protein method) compute_SCD_x() (Protein method) compute_SHD_custom() (Protein method)

E

elms (Protein property)

extract_feature_vector() (Protein method)

F

FCR (Protein property) fraction_aliphatic (Protein property) fraction_aromatic (Protein property)

fraction_negative (Protein property) fraction_polar (Protein property) fraction_positive (Protein property) fraction_proline (Protein property)

G

generate_phosphoisoforms() (Protein method)

H

hydrophobicity (Protein property)

K

kappa (Protein property)

kappa_x (in module sparrow.patterning.kappa)

L

linear_composition_profile() (Protein method) linear_property_profile() (Protein method)

linear_sequence_profile() (Protein method) low_complexity_domains() (Protein method)

M

molecular_weight (Protein property)

N

NCPR (Protein property)

P

patterning_percentile (in module sparrow.patterning.patterning) plaac_prion_like_domains() (Protein method) plugin (Protein property)

polymeric (Protein property) predictor (Protein property) Protein (class in sparrow.protein)

S

SCD (Protein property) sequence (Protein property)

SHD (Protein property) show_sequence() (Protein method)